US 12,437,002 B2
Method and system for managing analysis of omics data based on a user query
Johannes Knapp, Stuttgart (DE); and Aditi Bhargava, Hillsborough, CA (US)
Assigned to Aseesa LLC, South San Francisco, CA (US); and Aseesa LLC, Hillsborough, CA (US)
Filed by Aseesa LLC, South San Francisco, CA (US)
Filed on Sep. 15, 2022, as Appl. No. 17/945,112.
Prior Publication US 2024/0095284 A1, Mar. 21, 2024
Int. Cl. G06F 16/904 (2019.01); G06F 16/9038 (2019.01); G06F 16/907 (2019.01); G16B 25/00 (2019.01)
CPC G06F 16/904 (2019.01) [G06F 16/9038 (2019.01); G06F 16/907 (2019.01); G16B 25/00 (2019.02)] 20 Claims
OG exemplary drawing
 
1. A method of using an analytics system for analyzing a multi-source biological information combined into a dataset including different biological samples represented by a plurality of different measurement values and text, the method comprising:
examining the dataset to generate a plurality of configuration options that are presented to a user for selection through a user interface, wherein the plurality of configuration options for the dataset are derived based on the plurality of different measurement values and text, which includes at least one or more of biological parameters denoted by a symbol, concentration values, and sub-measurement for a sample denoted by a string;
receiving a selection of a set of configuration options from the plurality of configuration options;
converting the plurality of different measurement values and text into a high-performance format by transcoding the plurality of different measurement values and text to coded formats;
receiving, from the user at the user interface, a query that includes at least one query symbol that defines one or more search constraints, for which the dataset is to be searched, and defines analysis information unique to the dataset;
analyzing the dataset based on the query; and
generating an output that is configured for display based on the set of configuration options and the output is responsive to the query by selecting a plurality of sub-measurements that are associated with metadata when the plurality of sub-measurements have nonzero values for the query.