US 12,037,405 B2
Anti-CD70 antibody drug conjugates
Richard S Barnett, San Marcos, CA (US); Nickolas Knudsen, Escondido, CA (US); Ying Sun, San Diego, CA (US); Sandra Biroc, Alameda, CA (US); Timothy Buss, Carlsbad, CA (US); Tsotne Javahishvili, Del Mar, CA (US); Damien Bresson, San Diego, CA (US); Shailaja Srinagesh, San Diego, CA (US); Amha Hewet, San Diego, CA (US); and Jason Pinkstaff, Carlsbad, CA (US)
Assigned to Ambrx, Inc.
Filed by Ambrx, Inc., La Jolla, CA (US)
Filed on Aug. 29, 2022, as Appl. No. 17/898,384.
Application 16/224,346 is a division of application No. 14/410,021, granted, now 10,208,123, issued on Feb. 19, 2019, previously published as PCT/US2013/046669, filed on Jun. 19, 2013.
Application 17/898,384 is a continuation of application No. 16/224,346, filed on Dec. 18, 2018, granted, now 11,459,392.
Claims priority of provisional application 61/661,782, filed on Jun. 19, 2012.
Prior Publication US 2023/0295320 A1, Sep. 21, 2023
Int. Cl. C07K 16/28 (2006.01); A61K 47/42 (2017.01); A61K 47/68 (2017.01); C07K 5/062 (2006.01)
CPC C07K 16/2875 (2013.01) [A61K 47/42 (2013.01); A61K 47/6817 (2017.08); A61K 47/6845 (2017.08); A61K 47/6889 (2017.08); C07K 5/06052 (2013.01); C07K 2317/76 (2013.01)] 19 Claims
 
1. A compound comprising Formula (VIII) or (IX), wherein the compound is an anti-CD70 antibody conjugated to a dolastatin, wherein the conjugation occurs via a non-natural amino acid in the anti-CD70 antibody, and Formula (VIII) or (IX) has the following structure:

OG Complex Work Unit Chemistry
wherein:
A is optional, and when present is lower alkylene, substituted lower alkylene, lower cycloalkylene, substituted lower cycloalkylene, lower alkenylene, substituted lower alkenylene, alkynylene, lower heteroalkylene, substituted heteroalkylene, lower heterocycloalkylene, substituted lower heterocycloalkylene, arylene, substituted arylene, heteroarylene, substituted heteroarylene, alkarylene, substituted alkarylene, aralkylene, or substituted aralkylene;
B is optional, and when present is a linker selected from the group consisting of lower alkylene, substituted lower alkylene, lower alkenylene, substituted lower alkenylene, lower heteroalkylene, substituted lower heteroalkylene, —O—, -O-(alkylene or substituted alkylene)-, -S-, -S-(alkylene or substituted alkylene)-, —S(O)k— wherein k is 1, 2, or 3, —S(O)k(alkylene or substituted alkylene)-, —C(O)—, —C(O)-(alkylene or substituted alkylene)-, —C(S)—, —C(S)-(alkylene or substituted alkylene)-, —N(R′)—, —NR′-(alkylene or substituted alkylene)-, —C(O)N(R′)-, —CON(R′)-(alkylene or substituted alkylene)-, —CSN(R′)—, —CSN(R′)-(alkylene or substituted alkylene)-, —N(R′)CO-(alkylene or substituted alkylene)-, —N(R′)C(O)O—, —S(O)kN(R′)-, —N(R′)C(O)N(R′)-, —N(R′)C(S)N(R′)-, —N(R′)S(O)kN(R′)-, —N(R′)—N═, —C(R′)═N-, —C(R′)═N—N(R′)-, —C(R′)=N-N═, —C(R′)2-N═N-, and —C(R′)2-N(R′)-N(R′)-, wherein each R′ is independently H, alkyl, or substituted alkyl;
R is H, alkyl, substituted alkyl, cycloalkyl, or substituted cycloalkyl;
R1 is a polypeptide, wherein the polypeptide comprises a heavy chain variable region having the amino acid sequence of SEQ ID NO: 1;
R2 is a polypeptide;
R3 and R4 are each independently H, halogen, lower alkyl, or substituted lower alkyl, or R3 and R4 or two R3 groups optionally form a cycloalkyl or a heterocycloalkyl;
Z has the structure of:

OG Complex Work Unit Chemistry
wherein:
R5 is H, COR8, C1-C6 alkyl or thiazole;
R8 is OH;
R6 is OH or H; and
Ar is phenyl or pyridine;
R7 is H or C1-C6 alkyl; and
L is a linker selected from the group consisting of -alkylene-, -alkylene-C(O)—, -(alkylene-O)n-alkylene-, -(alkylene-O)n-alkylene-C(O)—, -(alkylene-O)n—(CH2)n′—NHC(O)—(CH2)n″—C(Me)2-S—S—(CH2)n′″—NHC(O)-(alkylene-O)n″″-alkylene-, -(alkylene-O)n-alkylene-W—, -alkylene-C(O)—W—, -(alkylene-O)n-alkylene-U-alkylene-C(O)—, and -(alkylene-O)n-alkylene-U-alkylene-;
wherein:
W has the structure of:

OG Complex Work Unit Chemistry
U has the structure of:

OG Complex Work Unit Chemistry
 and
each n, n′, n″, n′″ and n″″ is independently an integer greater than or equal to one;
or an active metabolite, or a pharmaceutically acceptable prodrug or solvate thereof.