US 12,344,598 B2
Bis(diazirine) derivatives as photo-crosslinker for treating corneal ectatic disorders
Jason Hill, Auburndale, MA (US); and Desmond Adler, Bedford, MA (US)
Assigned to Avedro, Inc., Waltham, MA (US)
Appl. No. 17/424,413
Filed by Avedro, Inc., Waltham, MA (US)
PCT Filed Jan. 24, 2020, PCT No. PCT/US2020/015071
§ 371(c)(1), (2) Date Jul. 20, 2021,
PCT Pub. No. WO2020/154673, PCT Pub. Date Jul. 30, 2020.
Claims priority of provisional application 62/796,803, filed on Jan. 25, 2019.
Prior Publication US 2022/0106298 A1, Apr. 7, 2022
Int. Cl. A61P 27/10 (2006.01); C07D 229/02 (2006.01); C07D 401/14 (2006.01); C07D 403/12 (2006.01); C07D 403/14 (2006.01)
CPC C07D 403/12 (2013.01) [A61P 27/10 (2018.01); C07D 229/02 (2013.01); C07D 401/14 (2013.01); C07D 403/14 (2013.01)] 17 Claims
 
1. A compound of Formula II

OG Complex Work Unit Chemistry
or a pharmaceutically acceptable salt thereof,
wherein:
each of B1 and B2 is independently —Z1—Z2—Z3, wherein:
Z1 is C1-3 alkylene;
Z2 is a bond; and
Z3 is H;
each of E1 and Q1 is C1-C6 alkylene, which is optionally substituted with 1-3 Ra;
each occurrence of R2 is independently selected from the group consisting of:
(i) Ra;
(ii) C1-C6 alkyl, which is substituted with 1-3 Ra;
(iii) L2-heterocyclyl, wherein the heterocyclyl includes from 3-10 ring atoms, wherein from 1-3 ring atoms are heteroatoms, each independently selected from the group consisting of N(Rd), O, and S; and wherein one or more of the heterocyclyl ring carbon atoms are optionally substituted with from 1-4 independently selected Rb,
(iv) L2-C6-C10 aryl, which is optionally substituted with from 1-4 Rc;
(v) L2-heteroaryl, wherein the heteroaryl includes from 5-10 ring atoms, wherein from 1-4 ring atoms are heteroatoms, each independently selected from the group consisting of N, N(Rd), O, and S, and wherein one or more of the heteroaryl ring carbon atoms are optionally substituted with from 1-4 independently selected Rc; and
(vi) H; or
(vii) R2 and Rd1, in the —C(═O)CH(R2)N(Rd1)— group, combine to form a ring including from 5-8 ring atoms, wherein the ring includes: (a) from 3-6 ring carbon atoms (in addition to CH(R2)), each of which is substituted with from 1-2 substituents independently selected from H and C1-3 alkyl; and (b) from 0-3 ring heteroatoms (in addition to the nitrogen atom attached to Rd1), which are each independently selected from the group consisting of N(Rd1), O, and S;
each occurrence of Ra is independently selected from the group consisting of: —OH; —SH; —F; —Cl; —Br; —NReRf; C1-4 alkoxy; C1-4 haloalkoxy; —C(═O)O(C1-4 alkyl); —C(═O)(C1-4 alkyl); —C(═O)OH; —CON(R′)(R″); —S(O)1-2(NR′R″); —S(O)0-2(C1-4 alkyl); cyano; —NR′C(═NR′)NR′R″; and C3-6 cycloalkyl optionally substituted with from 1-4 independently selected Rb;
each occurrence of Rb is independently selected from the group consisting of: —OH; —SH; —F; —Cl; —Br; —NReRf; C1-4 alkyl; C1-4 haloalkyl; C1-4 alkoxy; C1-4 haloalkoxy; —C(═O)O(C1-4 alkyl); —C(═O)(C1-4 alkyl); —C(═O)OH; —CON(R′)(R″); oxo; —S(O)1-2(NR′R″); —S(O)0-2(C1-4 alkyl); cyano; —NR′C(═NR′)NR′R″; and C3-6 cycloalkyl optionally substituted with from 1-4 independently selected C1-4 alkyl;
each occurrence of Rc is independently selected from the group consisting of: —OH; —SH; —F; —Cl; —Br; —NReRf; C1-4 alkyl; C1-4 haloalkyl; C1-4 alkoxy; C1-4 haloalkoxy; —C(═O)O(C1-4 alkyl); —C(═O)(C1-4 alkyl); —C(═O)OH; —CON(R′)(R″); —S(O)1-2(NR′R″); —S(O)0-2(C1-4 alkyl); cyano; —NR′C(═NR′)NR′R″; and C3-6 cycloalkyl optionally substituted with from 1-4 independently selected C1-4 alkyl;
each occurrence of Rd is selected from the group consisting of: H; C1-6 alkyl; C3-6 cycloalkyl; —C(O)(C1-4 alkyl); —C(O)O(C1-4 alkyl); —CON(R′)(R″); —S(O)1-2(NR′R″); —S(O)1-2(C1-4 alkyl); —OH; and C1-4 alkoxy;
each occurrence of Re and Rf is independently selected from the group consisting of: H; C1-6 alkyl; C3-6 cycloalkyl; —C(O)(C1-4 alkyl); —C(O)O(C1-4 alkyl); —CON(R′)(R″); —S(O)1-2(NR′R″); —S(O)1-2(C1-4 alkyl); —OH; and C1-4 alkoxy; and
each occurrence of R′ and R″ is independently selected from the group consisting of: H and C1-4 alkyl; or R′ and R″ together with the nitrogen atom to which each is attached forms a ring including from 3-8 ring atoms, wherein the ring includes: (a) from 1-7 ring carbon atoms, each of which is substituted with from 1-2 substituents independently selected from H and C1-3 alkyl; and (b) from 0-3 ring heteroatoms (in addition to the nitrogen atom attached to R′ and R″), which are each independently selected from the group consisting of N(R4), O, and S;
each occurrence of Rd1 is selected from the group consisting of: H, C1-6 alkyl; C3-6 cycloalkyl; —C(O)(C1-4 alkyl); —C(O)O(C1-4 alkyl); —CON(R′)(R″); —S(O)1-2(NR′R″); —S(O)1-2(C1-4 alkyl); —OH; and C1-4 alkoxy; or R2 and Rd1, in the —C(═O)CH(R2)N(Rd1)— group, combine to form a ring including from 5-8 ring atoms as defined above;
each of L2 in each occurrence is independently a single bond or a C1-C6 alkylene optionally substituted with 1-3 substituents independently selected from oxo and Ra; and
F1 is —N(Rd1)—, —O—, or —S—; and
each of H1, G1, L1, and M1 is independently selected from:
a bond;
—N(Rd1)—,
—O—;
S(O)p, wherein p is 0, 1, or 2;
C(═O);
C(═S);
CHR2;
—C(═O)CH(R2)N(Rd1)—; and
—C(═O)CH(R2)CH2N(Rd1)—.