US 12,259,394 B2
Protein sequencing via coupling of polymerizable molecules
Asmamaw Wassie, Leander, TX (US); Daniel Masao Estandian, Antioch, CA (US); Andrew John Price, San Mateo, CA (US); Boyang Hua, Oakland, CA (US); Joshua Young Cynming Yang, Richardson, TX (US); David Dodd, San Francisco, CA (US); Gerardo Fabian Delgado, Oakland, CA (US); and Elaine Jean Su, Martinez, CA (US)
Assigned to Glyphic Biotechnologies, Inc., New York, NY (US)
Filed by Glyphic Biotechnologies, Inc., New York, NY (US)
Filed on Apr. 4, 2024, as Appl. No. 18/627,091.
Application 18/627,091 is a continuation of application No. PCT/US2023/071456, filed on Aug. 1, 2023.
Claims priority of provisional application 63/394,475, filed on Aug. 2, 2022.
Prior Publication US 2024/0337661 A1, Oct. 10, 2024
This patent is subject to a terminal disclaimer.
Int. Cl. G01N 33/68 (2006.01); C12Q 1/68 (2018.01)
CPC G01N 33/6818 (2013.01) [C12Q 1/68 (2013.01)] 29 Claims
OG exemplary drawing
 
1. A method of sequencing a peptide at single amino acid resolution, comprising:
(a) providing said peptide and a linker, wherein said linker comprises a polymerizable molecule, and wherein said linker is capable of coupling to an amino acid of said peptide;
(b) coupling said linker to said amino acid of said peptide;
(c) coupling said linker to a capture moiety;
(d) cleaving said amino acid from said peptide to yield an amino acid-linker-capture moiety (AALC) complex;
(e) providing an additional linker, wherein said additional linker is capable of coupling to an additional amino acid of said peptide;
(f) coupling said additional linker to said additional amino acid, thereby generating an additional amino acid-linker complex; and
(g) coupling said additional amino acid-linker complex to said AALC complex, thereby generating a stacked AALC complex;
(h) contacting said stacked AALC complex with a plurality of binding agents, wherein individual binding agents of said plurality of binding agents have different specificity to different amino acid types;
(i) translocating said stacked AALC complex contacted with said plurality of binding agents through a nanopore or a nanogap; and
(j) identifying an amino acid type of said amino acid or said additional amino acid.