US 12,259,393 B2
Protein sequencing via coupling of polymerizable molecules
Asmamaw Wassie, Leander, TX (US); Daniel Masao Estandian, Antioch, CA (US); Andrew John Price, San Mateo, CA (US); Boyang Hua, Oakland, CA (US); Joshua Young Cynming Yang, Richardson, TX (US); David Dodd, San Francisco, CA (US); Gerardo Fabian Delgado, Oakland, CA (US); and Elaine Jean Su, Martinez, CA (US)
Assigned to Glyphic Biotechnologies, Inc., New York, NY (US)
Filed by Glyphic Biotechnologies, Inc., New York, NY (US)
Filed on Apr. 4, 2024, as Appl. No. 18/627,030.
Application 18/627,030 is a continuation of application No. PCT/US2023/071456, filed on Aug. 1, 2023.
Claims priority of provisional application 63/394,475, filed on Aug. 2, 2022.
Prior Publication US 2024/0337660 A1, Oct. 10, 2024
This patent is subject to a terminal disclaimer.
Int. Cl. G01N 33/68 (2006.01); C12Q 1/68 (2018.01)
CPC G01N 33/6818 (2013.01) [C12Q 1/68 (2013.01)] 30 Claims
OG exemplary drawing
 
1. A method of sequencing a peptide at single-amino acid resolution, comprising:
(a) providing said peptide, a capture moiety comprising a first nucleic acid molecule, a linker, and a second nucleic acid molecule;
(b) coupling said linker to a terminal amino acid of said peptide;
(c) coupling said linker to said second nucleic acid molecule;
(d) coupling said first nucleic acid molecule of said capture moiety to said second nucleic acid molecule;
(e) cleaving said terminal amino acid from said peptide to yield an amino acid-linker-capture moiety (AALC) complex;
(f) providing an additional linker comprising a third nucleic acid molecule, wherein said additional linker is capable of coupling to an additional amino acid of said peptide;
(g) coupling said additional linker to said additional amino acid, thereby generating an additional amino acid-linker complex;
(h) coupling said additional amino acid-linker complex to said AALC complex;
(i) cleaving said additional amino acid from said peptide, thereby generating a stacked AALC complex;
(j) translocating said stacked AALC complex through a nanopore or a nanogap;
(k) during (j), measuring a current signal, thereby obtaining a measured current signal; and
(l) using said measured current signal to determine an identity of said terminal amino acid and said additional amino acid, thereby sequencing said peptide.