US 12,227,775 B2
Modified template-independent DNA polymerase
Andrew P. Magyar, Arlington, MA (US); Peter Cavanagh, Stanford, CA (US); Miles Rogers, Cambridge, MA (US); Kirsty A. McFarland, Melrose, MA (US); Melissa M. Sprachman, Somerville, MA (US); Amanda Nicole Billings-Siuti, Framingham, MA (US); and Nicole E. Raustad, Charlestown, MA (US)
Assigned to The Charles Stark Draper Laboratory, Inc., Cambridge, MA (US)
Appl. No. 16/614,819
Filed by The Charles Stark Draper Laboratory, Inc., Cambridge, MA (US)
PCT Filed May 22, 2018, PCT No. PCT/US2018/033798
§ 371(c)(1), (2) Date Nov. 19, 2019,
PCT Pub. No. WO2018/217689, PCT Pub. Date Nov. 29, 2018.
Claims priority of provisional application 62/542,410, filed on Aug. 8, 2017.
Claims priority of provisional application 62/509,549, filed on May 22, 2017.
Prior Publication US 2020/0263152 A1, Aug. 20, 2020
Int. Cl. C12N 9/12 (2006.01); C07C 245/08 (2006.01); C07C 247/04 (2006.01); C12P 19/34 (2006.01); C12Q 1/68 (2018.01)
CPC C12N 9/1264 (2013.01) [C07C 245/08 (2013.01); C07C 247/04 (2013.01); C12P 19/34 (2013.01); C12Q 1/68 (2013.01); C12Y 207/07031 (2013.01)] 31 Claims
 
1. A genetically-engineered terminal deoxynucleotidyl transferase (TdT), wherein a wild-type TdT has been mutated at a single amino acid residue site to incorporate an azide or cyclooctene non-naturally occurring amino acid selected from the group consisting of: 4-Azido-L-phenylalanine (AzF), N-Propargyl-Lysine (PrK), Cyclooctene-L-Lysine (TCO-K) or Cyclooctyne-Lysine (SCO-K), wherein the non-naturally occurring amino acid is modified with a bifunctional azobenzene derivative comprising two orthogonal functional domains, wherein the first functional domain comprises a click reactive group for attachment to an affinity tag peptide for purification, and the second functional domain comprises a click reactive group whereby the bifunctional azobenzene derivative is attached to the non-naturally occurring amino acid, resulting in a TdT modified with the bifunctional azobenzene derivative capable of a reversible conformational change for controlled addition of a mononucleotide to the 3′ end of a single-stranded polynucleotide.