US 12,186,378 B2
Methods of treating skin cancer with histidine ammonia-lyase (HAL) agonists
Manuel Allen Revez Ferreira, Tarrytown, NY (US); Joshua Backman, Tarrytown, NY (US); Alexander Li, Tarrytown, NY (US); Michael Kessler, Tarrytown, NY (US); Eric Jorgenson, Tarrytown, NY (US); Aris Baras, Tarrytown, NY (US); and Goncalo Abecasis, Tarrytown, NY (US)
Assigned to Regeneron Pharmaceuticals, Inc., Tarrytown, NY (US)
Filed by Regeneron Pharmaceuticals, Inc., Tarrytown, NY (US)
Filed on Jul. 5, 2022, as Appl. No. 17/810,816.
Claims priority of provisional application 63/219,460, filed on Jul. 8, 2021.
Prior Publication US 2023/0016750 A1, Jan. 19, 2023
Int. Cl. A61K 38/51 (2006.01); A61K 31/198 (2006.01); A61P 35/00 (2006.01); C12Q 1/6869 (2018.01); C12Q 1/6886 (2018.01)
CPC A61K 38/51 (2013.01) [A61K 31/198 (2013.01); A61P 35/00 (2018.01); C12Q 1/6886 (2013.01); C12Q 1/6869 (2013.01); C12Q 2600/156 (2013.01)] 10 Claims
 
1. A method of treating a subject with a therapeutic agent that treats or prevents skin cancer, wherein the subject has skin cancer or is at risk of developing skin cancer, the method comprising:
determining whether the subject has a Histidine Ammonia-Lyase (HAL) variant nucleic acid molecule, wherein the HAL variant nucleic acid molecule is a genomic nucleic acid molecule having a nucleotide sequence comprising an adenine at a position corresponding to position 11,352 according to SEQ ID NO:2, or a guanine at a position corresponding to position 14,441 according to SEQ ID NO:3 encoding a HAL predicted gain-of-function polypeptide by:
obtaining or having obtained a biological sample from the subject; and
performing or having performed a sequence analysis on the biological sample to determine if the subject has a genotype comprising the HAL variant nucleic acid molecule encoding the HAL predicted gain-of-function polypeptide; and
administering or continuing to administer the therapeutic agent that treats or prevents skin cancer in a standard dosage amount to a subject that is HAL reference, and/or administering a HAL agonist to the subject that is HAL reference; or
administering or continuing to administer the therapeutic agent that treats or prevents skin cancer in an amount that is the same as or less than a standard dosage amount to a subject that is heterozygous for the HAL variant nucleic acid molecule, and/or administering a HAL agonist to the subject that is heterozygous for the HAL variant nucleic acid molecule;
wherein the presence of a genotype having the HAL variant nucleic acid molecule encoding the HAL predicted gain-of-function polypeptide indicates the subject has a decreased risk of developing skin cancer compared to a subject that does not have the HAL variant nucleic acid molecule encoding the HAL predicted gain-of-function polypeptide.