US 11,685,732 B2
MYST family histone acetyltransferase inhibitors
Darren Martin Harvey, Acton, MA (US); John Emmerson Campbell, Cambridge, MA (US); and Kenneth William Duncan, Westwood, MA (US)
Assigned to Epizyme, Inc., Cambridge, MA (US)
Appl. No. 16/766,890
Filed by Epizyme, Inc., Cambridge, MA (US)
PCT Filed Nov. 29, 2018, PCT No. PCT/US2018/063110
§ 371(c)(1), (2) Date May 26, 2020,
PCT Pub. No. WO2019/108824, PCT Pub. Date Jun. 6, 2019.
Claims priority of provisional application 62/592,215, filed on Nov. 29, 2017.
Prior Publication US 2022/0162197 A1, May 26, 2022
Int. Cl. C07D 403/12 (2006.01); C07D 309/06 (2006.01); C07D 309/08 (2006.01); C07D 231/12 (2006.01); C07D 231/56 (2006.01); C07D 471/10 (2006.01); C07D 263/28 (2006.01); C07D 263/50 (2006.01); C07D 205/04 (2006.01); C07D 265/30 (2006.01); C07D 207/08 (2006.01); C07D 275/03 (2006.01); C07C 311/19 (2006.01); C07C 311/32 (2006.01); C07C 311/49 (2006.01); C07C 255/00 (2006.01); C07C 307/02 (2006.01); C07C 317/50 (2006.01); A61K 31/40 (2006.01); A61K 31/18 (2006.01); A61K 31/165 (2006.01); A61P 35/00 (2006.01); C07D 405/12 (2006.01); C07D 211/24 (2006.01); C07D 213/54 (2006.01); C07D 223/04 (2006.01); C07D 233/64 (2006.01); C07D 241/04 (2006.01); C07D 257/04 (2006.01); C07D 401/12 (2006.01); C07D 401/14 (2006.01); C07D 403/14 (2006.01); C07D 405/14 (2006.01); C07D 413/12 (2006.01); C07D 417/12 (2006.01)
CPC C07D 405/12 (2013.01) [C07C 311/49 (2013.01); C07D 205/04 (2013.01); C07D 207/08 (2013.01); C07D 211/24 (2013.01); C07D 213/54 (2013.01); C07D 223/04 (2013.01); C07D 231/12 (2013.01); C07D 233/64 (2013.01); C07D 241/04 (2013.01); C07D 257/04 (2013.01); C07D 265/30 (2013.01); C07D 401/12 (2013.01); C07D 401/14 (2013.01); C07D 403/12 (2013.01); C07D 403/14 (2013.01); C07D 405/14 (2013.01); C07D 413/12 (2013.01); C07D 417/12 (2013.01)] 8 Claims
 
1. A compound of formula I′:

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or a pharmaceutically acceptable salt thereof, wherein:
Z is selected from

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each of R1 and R2 is independently selected from halogen and C1-4 aliphatic;
R3 is selected from hydrogen, halogen, —CN, —NR2, and optionally substituted C1-4 aliphatic;
each R is independently selected from hydrogen, optionally substituted C1-4 aliphatic, and —C(O)O(C1-4 aliphatic);
Ring A is an optionally substituted 5- or 6-membered heteroaryl ring having 1-4 heteroatoms independently selected from nitrogen, oxygen and sulfur;
each Ra is selected from halogen and optionally substituted C1-4 aliphatic; and
x is 0-3;
wherein optional substituents are independently selected from monovalent and divalent substituents,
each optional monovalent substituent on a substitutable carbon atom is independently selected from halogen; —(CH2)0-4R; —(CH2)0-4OR; —O(CH2)0-4R, —O—(CH2)0-4C(O)OR; —(CH2)0-4CH(OR)2; —(CH2)0-4SR; —(CH2)0-4Ph, optionally substituted with R; —(CH2)0-4O(CH2)0-1Ph optionally substituted with R; —CH═CHPh optionally substituted with R; —(CH2)0-4O(CH2)0-1-pyridyl optionally substituted with R; —NO2; —CN; —N3; —(CH2)0-4N(R)2; —(CH2)0-4N(R)C(O)R; —N(R)C(S)R; —(CH2)0-4N(R)C(O)NR2; —N(R)C(S)NR2; —(CH2)0-4N(R)C(O)OR; —N(R)N(R)C(O)R; —N(R)N(R)C(O)NR2; —N(R)N(R)C(O)OR; —(CH2)0-4C(O)R; —C(S)R; —(CH2)0-4C(O)OR; —(CH2)0-4C(O)SR; —(CH2)0-4C(O)OSiR3; —(CH2)0-4OC(O)R; —OC(O)(CH2)0-4SR; —(CH2)0-4SC(O)R; —(CH2)0-4C(O)NR02; —C(S)NR2; —C(S)SR; —SC(S)SR, —(CH2)0-4OC(O)NR2; —C(O)N(OR)R; —C(O)C(O)R; —C(O)CH2C(O)R; —C(NOR)R; —(CH2)0-4SSR; —(CH2)0-4S(O)2R; —(CH2)0-4S(O)2OR; —(CH2)0-40S(O)2R; —S(O)2NR2; —(CH2)0-4S(O)R; —N(R)S(O)2NR2; —N(R)S(O)2R; —N(OR)R; —C(NH)NR2; —P(O)2R; —P(O)R2; —OP(O)R2; —OP(O)(OR)2; SiR3; —(C1-4 straight or branched alkylene)O—N(R)2; or —(C1-4 straight or branched alkylene)C(O)O—N(R)2;
wherein each Ris optionally substituted and is independently hydrogen, C1-6 aliphatic, —CH2Ph, —O(CH2)0-1Ph, —CH2-(5-6 membered heteroaryl ring), or a 3-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
or two independent occurrences of Rare taken together with their intervening atom(s) form an optionally substituted 3- to 12-membered saturated, partially unsaturated, or aryl mono- or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
wherein each optional monovalent substituent bound to Ris independently halogen, —(CH2)0-2R, -(haloR), —(CH2)0-2OH, —(CH2)0-2OR, —(CH2)0-2CH(OR)2, —O(haloR), —CN, —N3, —(CH2)0-2C(O)R, —(CH2)0-2C(O)OH, —(CH2)0-2C(O)OR, —(CH2)0-2SR, —(CH2)0-2SH, —(CH2)0-2NH2, —(CH2)0-2NHR, —(CH2)0-2NR2, —NO2, —SiR3, —OSiR3, —C(O)SR, —(C1-4 straight or branched alkylene)C(O)OR, —SSR, or -Ph optionally substituted with R;
wherein each Ris unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C1-4 aliphatic, —CH2Ph, —O(CH2)0-1Ph, or a 5- to 6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, ═O, or ═S;
wherein each optional divalent substituent on a saturated carbon atom is ═O, ═S, ═NNR*2, ═NNHC(O)R*, ═NNHC(O)OR*, ═NNHS(O)2R*, ═NR*, ═NOR*, —O(C(R*2))2-3O—, or —S(C(R*2))2-3S—, or wherein a divalent substituent —O(CR*2)2-3O— is bound to vicinal substitutable carbons;
wherein each occurrence of R* is independently selected from hydrogen, optionally substituted C1-6 aliphatic, or an unsubstituted 5- to 6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
wherein each occurrence of R* is optionally substituted with halogen, —R, -(haloR), —OH, —OR, —O(haloR), —CN, —C(O)OH, —C(O)OR, —NH2, —NHR, —NR2, or —NO2;
wherein each Ris unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C1-4 aliphatic, —CH2Ph, —O(CH2)0-1Ph, or a 5- to 6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
wherein each optional substituent on a substitutable nitrogen atom is independently —R, —NR2,
—C(O)R, —C(O)OR, —C(O)NR2, —C(O)C(O)R, —C(O)CH2C(O)R, —S(O)2R, —S(O)2NR2, —C(S)NR2, —C(NH)NR2, or —N(R)S(O)2R;
wherein each R is independently hydrogen, optionally substituted C1-6 aliphatic, unsubstituted —OPh, or an unsubstituted 5- to 6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or,
two independent occurrences of R are taken together with their intervening atom(s) to form an unsubstituted 3- to 12-membered saturated, partially unsaturated, or aryl mono- or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
wherein each optional substituent on R is independently halogen, —R, -(haloR), —OH, —OR, —O(haloR), —CN, —C(O)OH, —C(O)OR, —NH2, —NHR, —NR, or —NO2,
wherein each Ris unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C1-4 aliphatic, —CH2Ph, —O(CH2)0-1Ph, or a 5- to 6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.